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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
ACC rs3007704 chr1:151952075 C/T EPGN chr4:75174190-75181024:+ -0.84 -7.52 7.47E-10 Box Plot
ACC rs3018388 chr11:130900711 T/C PRAMEF6 chr1:12998302-13007406:- 0.5 8.01 1.24E-10 Box Plot
ACC rs3027238 chr17:8135061 T/C PRHOXNB chr13:28552243-28562774:- -0.61 -7.7 3.83E-10 Box Plot
ACC rs3077840 chr17:39624406 CAAAA/C OR5V1 chr6:29323007-29399744:- -0.6 -7.86 2.11E-10 Box Plot
ACC rs3216036 chr13:60788853 TG/T PRAMEF16 chr1:13495254-13498260:+ 0.73 8.74 8.63E-12 Box Plot
ACC rs33991682 chr15:59933042 AAGACCCAAATATTGTTCCT TFDP3 chrX:132350697-132352376:- -1.18 -9.99 1.08E-13 Box Plot
ACC rs34004757 chr7:17251215 T/TTTTG TFDP3 chrX:132350697-132352376:- 0.86 8.09 9.3E-11 Box Plot
ACC rs34101253 chr2:117698096 C/T PRHOXNB chr13:28552243-28562774:- 0.71 9.55 4.9E-13 Box Plot
ACC rs34195107 chr8:112748013 C/T KRT6C chr12:52862300-52867569:- 0.71 8.21 5.9E-11 Box Plot
ACC rs34221687 chr13:104167546 GA/G OR5V1 chr6:29323007-29399744:- 0.63 8.05 1.06E-10 Box Plot
ACC rs34273164 chr7:47178235 G/A DRGX chr10:50572226-50604062:- 0.76 7.9 1.85E-10 Box Plot
ACC rs34287499 chr7:47178095 T/C DRGX chr10:50572226-50604062:- 0.76 7.9 1.85E-10 Box Plot
ACC rs34374322 chr6:46693416 A/G PRHOXNB chr13:28552243-28562774:- 0.61 7.57 6.11E-10 Box Plot
ACC rs34413031 chr10:34014653 G/A GAGE2D chrX:49207160-49214420:+ 0.59 7.7 3.86E-10 Box Plot
ACC rs34493808 chr1:26783726 C/T TFDP3 chrX:132350697-132352376:- 0.88 8.39 3.11E-11 Box Plot